biosubg
An algorithm integrated with a logic programming approach to discover subgraphs that best explain gene expression behavior in large‐scale signaling networks using random walks (publication & repository).
Learn moreI'm a Biologist. I got my degree from the Aristotle University of Thessaloniki (AUTH) and I especially enjoy Bioinformatics, Computational Biology and Evolution.
Learn moreI have an MSc in Nanosciences & Nanotechnologies from AUTH and have worked extensively with Monte Carlo simulations, both in small & large scale systems.
Learn moreI have a PhD in Physics in "Dynamic processes in complex networks using computer simulations" from the Computational Physics lab in AUTH.
Learn moreI have worked as a Postdoctoral researcher in modeling large scale biological networks, logical reasoning, combinatorial optimization and machine learning in the University of Heidelberg, King's College London and University College London. Check out my publications on Google Scholar .
Learn moreI am a self taught software developer specializing in full stack web development using Python with Django, Django REST Framework and PostgreSQL for the back end, and Vue.js for the front end. I have made several presentations on advanced Python topics, such as metaclasses and metaprogramming, functional programming and the descriptor protocol. Check out my material on GitHub.
Learn moreHere is a sample of my work.
An algorithm integrated with a logic programming approach to discover subgraphs that best explain gene expression behavior in large‐scale signaling networks using random walks (publication & repository).
Learn moreA Cytoscape plugin that allows the use of BioASP for influence graph consistency checking, prediction and repair operations and visualizing results through Cytoscape (publication & repository).
Learn moreA dashboard app in django made for the Kindle that shows live weather and bus arriving times, leveraging the Dark Sky and OASTH APIs. Check it out on makerfolio (repository).
Learn moreA REST API with mobile notifications and geolocation for the HATCH Business Network, which reduces the noise of the online world and delivers to you the most relevant and meaningful business connections.
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